YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109106011
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTENSRRAN LSLPQEPSSV PAFEVLAVSP QEESSGGLPK SASSPPQHTW LTVLKKEQEF  60
   61 LGVTQILIGM ICLCFGTVVC SVLDISHIEG DIFSSFKAGY PFWGAIFFSI SGILSILSER 120
  121 RNATYLARGS LGANTASSIA GATGITILII NLKKSSAYIH IHSCQKYFGT EKCFMASFSA 180
  181 EMVVLMLFLT ILGLGSALSL TIYGAGEELK GNKVPDDRVY EELNIYSAIY SELEDRGEMS 240
  241 PPTDS

Type	Start	End	Confidence
Cytoplasmic	1	60	0.98
Transmembrane Helix	61	85	0.86
Non-Cytoplasmic	86	98	0.83
Transmembrane Helix	99	118	0.94
Cytoplasmic	119	129	0.84
Transmembrane Helix	130	150	0.92
Non-Cytoplasmic	151	183	0.88
Transmembrane Helix	184	204	0.93
Cytoplasmic	205	245	0.94