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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109105916
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGIVVFRRR WSVGSDDLVL PAIFLFLLHT TWFVILSVVL FGLVYNPHEA CSLNLVDHGR  60
   61 GYLGILLSCM IAEMAIIWLS MRGGILYTEP RDSMQYVLYV RLAILVIEFI YAIVGIVWLT 120
  121 QYYTSCNDLT AKNVTLGMVV CNWVVILSVC ITVLCVFDPT GRTFVKLRAT KRRQRNLRTY 180
  181 NLRHRLEEGQ ATSWSRRLKV FLCCTRTKDS QSDAYSEIAY LFAEFFRDLD IVPSDIIAGL 240
  241 VLLRQRQRAK RNAVLDEAFR DYYSRDFPGH AWLPLGLALK GLLTAGLVDA ANNDILAFLS 300
  301 GMPVTRNTKY LDLKNSQEML RYKEVCYYML FALAAYGWPM YLMRKPACGL CQLARSCSCC 360
  361 LCPARPRFAP GVTIEEDNCC GCNAIAIRRH FLDENMTAVD IVYTSCHDAV YETPFYVAVD 420
  421 HDKKKVVISI RGTLSPKDAL TDLTGDAERL PVEGHHGTWL GHKGMVLSAE YIKKKLEQEM 480
  481 VLSQAFGRDL GRGTKHYGLI VVGHSLGAGT AAILSFLLRP QYPTLKCFAY SPPGGLLRIG 540
  541 LSQLEGFRRQ LLDVLQRSTK PKTLWQAGPW ARYQVPGGEQ GSKALWDCAC LEEPGSGEVE 600
  601 LLPPDYTRLW THPSDLTIAL SASTPLYPPG RIIHVVHNHP AEQCCCCEQE EPTYFAIWGD 660
  661 NKAFNEVIIS PAMLHEHLPY VVMEGLNKLH NQMKEPVSIS GCSNCCKPPT SCLITHSLQA 720
  721 GLRSPRLPTQ QRPAAHGRDQ EETRMRKEVM RSLGVAPRGA GSEIGMEPVG SKSQSEMSLE 780
  781 GFSEGRLLSP VVAAAAARQD PVELLLLSTQ ERLAAELQAR RAPLATMESL SDTESLYSFD 840
  841 SRRSSGFRSI RGSPSLHAVL ERDEGHLFYI DPAIPEENPS LSSRTELLAA DSLSKHSQDT 900
  901 QPLEAALGSG GVTPERPPSA SANDEEEEVG GGGGGLASRG ELALYNGRLG DSPSPQVLEF 960
  961 AEFIDSLFNL DSKSSSFQDL YCMVVPESPT SDYAEGPKSP SQQEILLRAQ FEPNLVPKPP1020
 1021 RLFAGSADPS SGISLSPSFP LSSSGELMDL TPTGLSSQEC LAADKIRTST PTGHGASPAK1080
 1081 QDELVISAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle