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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109109318
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRYLLKTLL QMNLFADSLA GDISNSSELL LGFNSSLAAL NHTLLPPGDP SLNGSTVGPE  60
   61 DAMPRIVEQP PDLLVSRGEP ATLPCRAEGR PRPNIEWYKN GARVATVRED PRAHRLLLPS 120
  121 GALFFPRIVH GRRARPDEGV YTCVARNYLG AAASRNASLE VAVLREDFRQ SPGNVVVAVG 180
  181 EPTVLECAPP RGHPEPSVSW RKDGARLKEE EGRITIRRGK LMMSHTLKSD AGMYVCVASN 240
  241 MAGERESAAA EVVVLERPSF LRRPVNQVVL ADAPVNFLCE VKGDPPPRLH WRKEDGELPI 300
  301 GRYEIRSDHS LWIGPVSAED EGTYTCVAEN SVGRAEASGS LSVHVPPQLV TQPQDQMAAP 360
  361 GESVAFQCET KGNPPPAIFW QKEGSQVLLF PSQSLQPTGR FSVSPRGQLN ITAVQRGDAG 420
  421 YYVCQAVSVA GSILAKALLQ IKGASLDGLP PVILQGPANQ TLVLGSSVWL PCRVTGNPQP 480
  481 SVRWKKDGQW LQGDDLQFKP MANGTLYIAN VQEMDMGFYS CVAKSSVGEA TWSGWLKMRE 540
  541 DWGVSPDPPT EPSTPPGPPS QPVVTEITKN SITLTWEPNP QTGAAVTSYV IEAFSPAAGN 600
  601 TWRTVADGVQ LETHTVSGLQ PNTIYVFLVR AVGTWGLSDP SPVSEPVRTQ DSSPSRPVED 660
  661 PWRGQQGLAE VAVRLQEPIV LGPRTLQVSW IVDGPVQLVQ GFRVSWRVAG PDRGSWTMLD 720
  721 LQSPSQQSTV LRGLPPGTQI QIKVQAQGQE GLGAESLSVT RSIPEEAPSG PPQGVAVALG 780
  781 GDGNSSITVT WEPPLPSQQN GVITEYQIWC LGNESRFHLN RSAAGGARSA MLRGLVPGLL 840
  841 YRTLVAAATS AGVGVASAPV LVQLPSPPDL EPGLEVGAGL AEQLARVLRK PAFLAGSGAA 900
  901 CGALLLGLCA ALYRRRKQRK ELSHYTASFA YTPAVSFPHS EGLSGASSRP PMGLGPAPYP 960
  961 WLADSWPHPS RSPSAQEPRG SCCPSNPDPD DRYYNEAGIS LYLAQTARGT AAPGEGPVYS1020
 1021 TIDPAGEELQ TFHGGFPQHP SGDAGPWSQY APPEWSQGDS APSPTPSYGQ QSTATLTPSP1080
 1081 PDPPQPPTDM PHLHQMPRRV PLGPSSPLSV SQPMLGIREG RPAGSAALPH LSPSPAPSIA1140
 1141 SSAPGRTWQG NGEMTPPLQG PRARFRKKPK ALPYRRENSP GDLPPPPLPP PEEEASWALE1200
 1201 LRAAGSMSSL ERERSGERKV VQAMPLAAQR GPHPDEEAWL PYSRPSFLSR GQGTSTCSTA1260
 1261 GSNSSRGSSS SRGSRGPGRS RSRSRSQSQR PGQKRREEPR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle