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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109108259
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSRGHLYL WMCLTAALAS FLVGFMLGWF IKPLKETTPS VRYLLSIRWE LVSEMKAENI  60
   61 KSFLRSFTKL PHLAGTEQNL LLAKEIQTQW KKFGLDSAKL VHYDVLLSYP NETNANYISI 120
  121 VDEHETEIFK TSYFEPTPDG YENVTNIVPP YNAFSAQGMP EGDLIYVNYA RTEDFFKLER 180
  181 EMGINCTGKI VIARYGKIFR GNKVKNAMLA GAIGIILYSD PADYFAPEVQ PYPKGWNLPG 240
  241 TAAQRGNVLN LNGAGDPLTP GYPAKEYTFR LDVEEGVGIP KIPVHPIGYN DAEILLRHLG 300
  301 GIAPPDESWK GALNVSYSIG PGFTGNNSSR KVRMHVHNIN KITRIYNVIG TIRGSVEPDR 360
  361 YVILGGHRDS WVFGAIDPTS GVAVLQEIAR SFGKLMSKGW RPRRTIIFAS WDAEEFGLLG 420
  421 STEWAEENVK ILQERSIAYI NSDSSIEGNY TLRVDCTPLL YQLVYKLTKE IPSPDDGFES 480
  481 KSLYESWLEK DPSPESKNLP RINKLGSGSD FEAYFQRLGI ASGRARYTKN KRTDKYSSYP 540
  541 VYHTIYETFE LVEKFYDPTF KKQRCVAQLR GALVYELVDS KIIPFNIQDY AEALKNYAAS 600
  601 IYNLSKKHDQ QLRDYGVSFD SLFSAVKNFS EAASDFHKRL IQVDLNNPIA VRMMNDQLML 660
  661 LERAFIDPLG LPGKRFYRHI IFAPSSHNKY AGESFPGIYD AIFDIENKAD SRLAWKEVKK 720
  721 HISIAAFTIQ AAAGTLKEVL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle