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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109108238
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLDPCLTI GNFEKSHFWE RLYPTVVGGG RAVEQQHRRG SREADSARAK RWNLLHETDS  60
   61 AVATARRPRW LCAGALVLAG GFFLLGFLFG WFIKSSSEAT NITPKHNMKA FLDELKAENI 120
  121 KKFLHNFTQI PHLAGTEQNF QLAKQIQSQW KEFGLDSVEL THYDVLLSYP NKTHPNYISI 180
  181 INEDGNEIFN TSLFEPPPAG YENVSDIVPP FSAFSPQGMP EGDLVYVNYA RTEDFFKLER 240
  241 DMKINCSGKI VIARYGKVFR GNKVKNAQLA GATGVILYSD PADYFAPGVK SYPDGWNLPG 300
  301 GGVQRGNILN LNGAGDPLTP GYPANEYAYR RGMAEAVGLP SIPVHPIGYY DAQKLLEKMG 360
  361 GSASPDSSWR GSLKVPYNVG PGFTGNFSTQ KVKMHIHSTS EVTRIYNVIG TLRGAVEPDR 420
  421 YVILGGHRDS WVFGGIDPQS GAAVVHEIVR SFGTLKKEGW RPRRTILFAS WDAEEFGLLG 480
  481 STEWAEENSR LLQERGVAYI NADSSIEGNY TLRVDCTPLM YSLVYNLTKE LESPDEGFEG 540
  541 KSLYESWTKK SPSPEFSGMP RISKLGSGND FEVFFQRLGI ASGRARYTKN WETNKFSSYP 600
  601 LYHSVYETYE LVEKFYDPMF KYHLTVAQVR GGMVFELANS VVLPFDCRDY AVVLRKYADK 660
  661 IYNISMKHPQ EMKTYSVSFD SLFSAVKNFT EIASKFSERL RDFDKSNPIL LRMMNDQLMF 720
  721 LERAFIDPLG LPDRPFYRHV IYAPSSHNKY AGESFPGIYD ALFDIESKVD PSQAWGEVKR 780
  781 QISIATFTVQ AAAETLSEVA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle