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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109107707
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWHLRPAAK RLVLARPSCA HLAASPPAPP THTQTHCSRK GGQETGAASA RASARSPLPP  60
   61 TCAPPSGDAR RGELAGKRAG SPRLALSVGE GGQEASGTCH CRRERGDFRL ALAFLHFPPA 120
  121 DQSVSSPLPL PRYEALCRGL APYRQRGPAP RTPLWTERFP QQPERGAAPR GEAGNSRGLS 180
  181 GGALAGSAAP PSSSRAGGGA LLSHTRALAG PSPPLRPSSS WSLLRLPSGR IDVPSASCSR 240
  241 RRGRTFSQKK AAIEREYAQG IQKLASQYLK RDWPGVKADD RNDYRSMYPV WKSFLEGTMQ 300
  301 VAQSRMNICE NYKNFISEPA RTVRSLKEQQ LKRCVDQLTK IQTELQETVK DLAKGKKKYF 360
  361 ETEQMAHAVR EKADIEAKSK LSLFQSRISL QKASVKLKAR RSECNSKATH ARNDYLLTLA 420
  421 AANAHQDRYY QTDLVNIMKA LDGNVYDHLK DYLIAFSRTE LETCQAVQNT FQFLLENSSK 480
  481 VVRDYNLQLF LQENAVFHKP QPFQFQPCDS DTSRQLESET GTTEEHSLNK EARKWATRVA 540
  541 REHKNIVHQQ RVLDDLECHG PAVSEQSRAE LEQKIDEARE NIRKAEIIKL KAEARLDLLK 600
  601 QIGVSVDTWL KSAMSQVMEE LENERWARPP AVTSNGTLHS LNADTEREEG EEFEDNMDVF 660
  661 DDSSSSPSGT LRNYPLTCKV VYSYKASQPD ELTIEEHEVL EVIEDGDMED WVKARNKVGQ 720
  721 VGYVPEKYLQ FPTSNSLLSM LQSLATLDSR SHTSSNSTEA ELVSGSLNGD ASVCFVKALY 780
  781 DYEGQTDDEL SFPEGAIIRI LNKENQDDDG FWEGEFNGRI GVFPSVLVEE LSASENGDTP 840
  841 WMREIQISPS PKPHASLPPL PLYDQPPSSP YPSPDKRSSL YFPRSPSANE NSLHAESPGF 900
  901 SQASRHTPET SHGKLRPVRA APPPPMQNHR RPAEKIEDVE ITLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle