YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109107241
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLRSPHRQ RPDRLLQIAR CALTPGGGGD AEKLIARHSG RCGRQQPETK GQLCKRLRQV  60
   61 MDGSVGRERA RGLDGGFHIC TLQLTPQAQQ VIGPLLTHVM DLKSTPGQSG FWKHEGDATQ 120
  121 LGRRTPPPIG CCALAELFRP TTAGIRAVAG AGRHQRRYPA QVSPPLPQGS GCTLPPPLPP 180
  181 PLIQATFCQR GVMGFQKFSA FLALSILVLL QAGSLHAAPF RSALESSPDP ATLSEEEARL 240
  241 LLAALVHDYV QMKASELEQE QETEGSSLDS PRSKRCGNLS TCMLGTYTQD FNKFHTFPQT 300
  301 AIGVGAPGKK RDMSSDLERN HRRYNHCPEE SL

Type	Start	End	Confidence
Cytoplasmic	1	197	0.59
Transmembrane Helix	198	218	0.65
Non-Cytoplasmic	219	332	0.89