YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109106901
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVASCGSG AGSTGSAVAT ASKSNVTSFQ RRGPRASGTN DSGPRLVSIA GTRPSVRNGQ  60
   61 LLVSTGLPAL DQLLGGGLAI GTVLLIEEDK YNIYSPLLFK CFLAEGIVNG HTLLVASAKE 120
  121 DPANILQELP APLLDDNSKK EFDEDVYNHK TPESNIKMKI AWRYQLLPKM EIGPVSSRFG 180
  181 HYYDASKRIP QELIEASNWH GFFLPEKISS TLKVEPCSLT PGYIKLLQFI QNIISEEGFD 240
  241 GSNPQKKQRN VLRIGIQNLG SPLWGDDICC AENGSNSHSL TKFLYVLRGL LRTSLSACII 300
  301 TMPTHLIQNK AIIARVTNLS DIVIGLESFI GSERETNPLY KDYHGLIHIR QIPRLNNLIC 360
  361 DESDVKDLAF KLKRKLFTIE RLHLPPDLSD TVSRSSKQDL AESTKRLGPG CGMMAGGKKH 420
  421 LDF

Type	Start	End	Confidence
Signal Peptide	1	21	0.91
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	423	0.99