YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109106811, gi...
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRKKVDNRI RILIENGVAE RQRSLFVVVG DQGKDQVVIL HHMLSKATVK ARPSVLWCYK  60
   61 KELGFSSHRK KRMRQLQKKI KNGTLNIKQD DPFELFIAAT NIRYCYYNET HKILGNTFGM 120
  121 CVLQDFEALT PNLLARTVET VEGGGLVVIL LRTMNSLKQL YTMTMDVHSR YRTEAHQDVV 180
  181 GRFNERFLLS LASCKKCLVI DDQLNILPIS SHVATIEALP PQTPDESLGP SDLELRELKE 240
  241 SLQDTQPVGV LVDCCKTLDQ AKAVLKFIEG ISEKTLRSTV ALTAARGRGK SAALGLAIAG 300
  301 AVAFGYSNIF VTSPSPDNLH TLFEFVFKGF DALQYQEHLD YEIIQSLNPE FNKAVIRVNV 360
  361 FREHRQTIQY IHPADAVKLG QAELVVIDEA AAIPLPLVKS LLGPYLVFMA STINGYEGTG 420
  421 RSLSLKLIQQ LRQQSAQSQV STTAENKTTT TARLASARTL HEVSLQESIR YAPGDAVEKW 480
  481 LNDLLCLDCL NITRIVSGCP LPEACELYYV NRDTLFCYHK ASEVFLQRLM ALYVASHYKN 540
  541 SPNDLQMLSD APAHHLFCLL PPVPPTQNAL PEVLAVIQVC LEGEISRQSI LNSLSRGKKA 600
  601 SGDLIPWTVS EQFQDPDFGG LSGGRVVRIA VHPDYQGMGY GTRALQLLQM YYEGRFPCLE 660
  661 EKVLETPQEI HTVSSEAVSL LEEVITPRKD LPPLLLKLNE RPAERLDYLG VSYGLTPRLL 720
  721 KFWKRAGFVP VYLRQTPNDL TGEHSCIMLK TLTDEDEADQ GGWLAAFWKD FRRRFLALLS 780
  781 YQFSTFSPSL ALNIIQNRNM GKPAQPALSR EELEALFLPY DLKRLEMYSR NMVDYHLIMD 840
  841 MIPAISRIYF LNQLGDLALS AAQSALLLGI GLQHKSVDQL EKEIELPSGQ LMGLFNRIIR 900
  901 KVVKLFNEVQ EKAIEEQMVA VKDVVMEPTM KTLSDDLDEA AKEFQEKHKK EVGKLKSMDL 960
  961 SEYVIRGDDE EWNEVLNKAG PNASIISLKS DKKRKLEAKQ EPKQSKKLKK NRDRKNKKDM1020
 1021 KLKRKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle