YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109106401
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAATARLW WRGIVGAAAL TRGAGRPSVL LLPVRRESAG ADTRPTVRPR NDVAHKQLSA  60
   61 FGEYVAEILP KYVQQVQVSC FNELEVCIHP DGIIPVLTFL RDHTNAQFKS LVDLTAVDVP 120
  121 TRQNRFEIVY NLLSLRFNSR IRVKTYTDEL TPIESAMSVF KAANWYEREI WDMFGVFFAN 180
  181 HPDLRRILTD YGFEGHPFRK DFPLSGYVEV RYDDEVKRVV AEPVELAQEF RKFDLNSPWE 240
  241 AFPVYRQPPE SLKLEAGDKK PEAK

Type	Start	End	Confidence
Signal Peptide	1	23	0.67
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	264	0.98