YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109099955
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIKDQGAQM EPLLPTRNDE EAVVDRGGTR SILKTHFEKE DLEGHRTLFI GVHVPLGGRK  60
   61 SHRRHRHRGH KHRKRDRERD SGLEDGRESP SFDTPSQRVQ FILGTEDDDE EHIPHDLFTE 120
  121 LDEICWREGE DAEWRETARW LKFEEDVEDG GERWSKPYVA TLSLHSLFEL RSCILNGTVL 180
  181 LDMHANTLEE IADMVLDQQV SSGQLNEDVR HRVHEALMKQ HHHQNQKKLT NRIPIVRSFA 240
  241 DIGKKQSEPN SMDKNGQVVS PQSAPACVEN KNDVSRENST VDFSKVDLHF MKKIPPGAEA 300
  301 SNILVGELEF LDRTVVAFVR LSPAVLLQGL AEVPIPTRFL FILLGPLGKG QQYHEIGRSI 360
  361 ATLMTDEVFH DVAYKAKDRN DLVSGIDEFL DQVTVLPPGE WDPSIRIEPP KNVPSQEKRK 420
  421 IPAVPNGTAA HGEAEPHGGH SGPELQRTGR IFGGLILDIK RKAPYFWSDF RDAFSLQCLA 480
  481 SFLFLYCACM SPVITFGGLL GEATEGRISA IESLFGASMT GIAYSLFGGQ PLTILGSTGP 540
  541 VLVFEKILFK FCKEYGLSYL SLRASIGLWT ATLCIILVAT DASSLVCYIT RFTEEAFASL 600
  601 ICIIFIYEAL EKLFELSEAY PINMHNDLEL LTQYSCNCVE PHNPSNDTLK EWRESNISAS 660
  661 DIIWENLTVS ECKSLHGEYV GRACGHDHPY VPDVLFWSVI LFFSTVTLSA TLKQFKTSRY 720
  721 FPTKVRSIVS DFAVFLTILC MVLIDYAIGI PSPKLQVPSV FKPTRDDRGW FVTPLGPNPW 780
  781 WTVIAAIIPA LLCTILIFMD QQITAVIINR KEHKLKKGCG YHLDLLMVAV MLGVCSIMGL 840
  841 PWFVAATVLS ITHVNSLKLE SECSAPGEQP KFLGIREQRV TGLMIFILMG SSVFMTSILK 900
  901 FIPMPVLYGV FLYMGASSLK GIQFFDRIKL FWMPAKHQPD FIYLRHVPLR KVHLFTIIQM 960
  961 SCLGLLWIIK VSRAAIVFPM MVLALVFVRK LMDLLFTKRE LSWLDDLMPE SKKKKLEDAE1020
 1021 KEEEQSMLAM EDEGTVQLPL EGHYRDDPSV INISDEMSKT ALWRNLLITA DNSKDKESSF1080
 1081 PSKSIESRKE KKADSGKGVD RETCL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle