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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109104433
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAMKQEQQP TPGARASQAQ PADQARLPRL PLPTLPPAPV PGSPAYPWTL REVRASECAP  60
   61 EPGERMRKVE SRGEGGREEL GSNSPPQRNW KGIAIALLVI LVVCSLITMS VILLTPDELT 120
  121 NSSETRLSLE DLFRKDFVLH DPEARWINDT DVVYKSENGH VIKLNIETNA TTLLLENTTF 180
  181 VTFKASRHSV SPDLKYVLLA YDVKQIFHYS YTASYVIYNI HTREVWELNP PEVEDSVLQY 240
  241 AAWGVQGQQL IYIFENNIYY QPDIKSSSLR LTSSGKEEII FNGIADWLYE EELLHSHIAH 300
  301 WWSPDGERLA FLMINDSLVP TMVIPRFTGA LYPKGKQYPY PKAGQVNPTI KLYVVNLYGP 360
  361 THTLELMPPD SFKSREYYIT MVKWVSNTKT VVRWLNRPQN ISILTVCETT TGACNKKYEM 420
  421 TSDTWLSKQN EEPVFSRDGS KFFMTVPVKQ GGRGEFHHIA MFLIQSKSEQ ITVRHLTSGN 480
  481 WEVIKILAYD ETTHKIYFLS TESSPRGRQL YSASTEGLLN RQCISCNFMK EQCTYFDASF 540
  541 SPMNQHFLLF CEGPRVPVVS LHSTDNPAKY FILESNSMLK EAILKKKIVK PEVKILHIDD 600
  601 YELPLQLSLP KDFMDRNQYA LLLIMDEEPG GQLVTDKFHI DWDSVLIDMD NVIVARFDGR 660
  661 GSGFQGLKIL QEIHRRLGSV EVKDQITAVK FLLKLPYIDS KRLSIFGKGY GGYIASMILK 720
  721 SDEKLFKCGS VVAPITDLKL YASAFSERYL GMPSKEESTY QAASVLHNIH GLKEENILII 780
  781 HGTADTKVHF QHSAELIKHL IKAGVNYTMQ VYPDEGHNVS EKSKYHLYST ILKFFSDCLK 840
  841 EEISVLPQEP EEDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle