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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109103463
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGERRRRA VPAEGVRTVE RAARGGPGRR DGRGGGPRST AGGVALAVVV LSLALGMSGR  60
   61 WVLAWHRARR AVTLHSAPPV LPADSSSPAV APDLFWGTYR PHVYFGMKTR SPKPLLTGLM 120
  121 WAQQGTTPGT PKLRHTCEQG DGVGPYGWEF HDGLSFGRQH IQDGALKLTT EFVKRPGGQH 180
  181 GGDWSWRVTV EPQASGTSAI PLVSLFFYVV TDSNEVLIPE VGSKGQLKFI SGHTSELGDF 240
  241 RFTLLPPTSP GDTAPKYGSY NVFWTSNPGL PLLTEMVKSR LNSWFQHRPP GASPERYLGL 300
  301 PGSLKWEDRG PSGQGQGQFL IQQVTLKVPF SIEFVFESGS AKAGGNQVLP RLAGSLLTHA 360
  361 LESHAEAFRE RFEKTFQLKE KGLSPGEQAL GQAALSSLLG GIGYFYGQGL VLPDMGVEGT 420
  421 EQKVDPALFP PLPLFTAVPS RSFFPRGFLW DEGFHQLVVQ RWDPSLTREA LGHWLGLLNA 480
  481 DGWIGREQIL GDEARARVPP EFLVQRAVHA NPPTLLLPVA HMLEVGDPDD LAFLRKAFPR 540
  541 LHAWFSWLHQ SQAGPVPLSY RWRGRDPALP TLLNPKTLPS GLDDYPRASH PSVTERHLDL 600
  601 RCWVALGARV LTQLAEYLGE AEVAAELGPL AASLEAAESL DELHWAPELG VFADFGNHTK 660
  661 AVQLKPRPPQ GLVRVVGWPQ PRLQYVDALG YVSLFPLLLR LLDPNSSRLG PLLDILADSR 720
  721 HLWSPFGLRS LAASSSFYGQ RNSEHDPPYW RGAVWLNVNY LALGALHHYG HLEGPHQARA 780
  781 AKLHSELRAN VVGNVWRQYQ ATGFLWEQYS DRDGRGMGCR PFHGWTSLVL LAMAEDY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle