YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109103421
Protein type:	Transmembrane
Type Confidence:	0.47
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLRENVRCR SLRSLKLRCG PWSRIVLSNS DSAHLLVLIL TNFSCPRSSR SSKTFKPKKN  60
   61 IPEGSHQYEL LKHAEATLGS GNLRQAVMLP EGEDLNEWIA VNTVDFFNQI NMLYGTITEF 120
  121 CTEASCPVMS AGPRYEYHWA DGTNIKKPIK CSAPKYIDYL MTWVQDQLDD ETLFPSKIGV 180
  181 PFPKNFMSVA KTILKRLFRV YAHIYHQHFD SVMQLQEEAH LNTSFKHFIF FVQEFNLIDR 240
  241 RELAPLQELI EKLGSKDR

Type	Start	End	Confidence
Cytoplasmic	1	20	0.45
Transmembrane Helix	21	40	0.46
Non-Cytoplasmic	41	258	0.98