YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109102083
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVATAAAIL AALGGALWLA ARRFAGSGVQ RQRGGGDPGL MHGKTVLITG ANSGLGRATA  60
   61 AELVRLGARV IMGCRDRARA EEAAGQLRRE LRQAAECGPE PGVGGAGELI VRELDLASLR 120
  121 SVRAFCQEML QEEPRLDVLI NNAGIFQCPY MKTEDGFEMQ FGVNHLGHFL LTNLLLGLLK 180
  181 SSAPSRIVVV SSKLYKYGDI NFDDLNSEQS YNKSFCYSRS KLANILFTRE LARRLEGTNV 240
  241 TVNVLHPGIV RTNLGRHIHI PLLVRPLFNL VSWAFFKTPV EGAQTSIYLA SSPEVEGVSG 300
  301 RYFGDCKEEE LLPKALDESV ARKLWDISEV MVGLLK

Type	Start	End	Confidence
Signal Peptide	1	25	0.91
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	336	0.99