YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109100482
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARTGHTAL RRVFSGCLPK SATAACAPAR ALAPVRNGRY LASCGILMSR TLPRHTSILP  60
   61 KEICVRTFFK ITAPLINKRK EYSERRILGY SMQEMYDVVS GVEDYKHFVP WCKKSDVISK 120
  121 RSGYCKTRLE IGFPPVLERY TSVVTLVKPH LVKASCTDGR LFNHLETIWR FSPGLPGYPR 180
  181 TCTLDFSISF EFRSLLHSQL ATLFFDEVVK QMVAAFERRA CKLYGPETNI PRELMLHEVH 240
  241 HT

Type	Start	End	Confidence
Signal Peptide	1	24	0.89
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	242	0.98