YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109099959
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQMSKVSGRG KSFVTKTPYL QMRNLYCQRN ICEAKQSWRV YKSSAPWCRS AELRTQSTSK  60
   61 VPKEGLLSLH LLCSTAHYRK TAEMKSIYFV AGLFVMLVQG SWQRSLQDTE EKSRSVSASQ 120
  121 TDPLGDPDQM NEDKRHSQGT FTSDYSKYLD SRRAQDFVQW LMNTKRNRNN IAKRHDEFER 180
  181 HAEGTFTSDV SSYLEGQAAK EFIAWLVKGR GRRDFPEEVA IVEELGRRHA DGSFSDEMNT 240
  241 VLDNLATRDF INWLIQTKIT DRK

Type	Start	End	Confidence
Cytoplasmic	1	85	0.56
Transmembrane Helix	86	102	0.55
Non-Cytoplasmic	103	263	0.99