YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109099266
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDRLPDLTA VSGSRGPGGS WVRMVELCTR PPRVLGPGLQ RPLLVGARFS HPALAAAGAP  60
   61 PPCRLPLGGP AAPLKRVLQR PPCKTGSVSE RGLLGSSGSG GSGSRGGTWL GRRGQVCVAP 120
  121 TSTAAPPLVG VEEIRNSIDK ITQYVEEVKK NHSIILSAPN PEGKIKEELE DLNKEIKKTA 180
  181 NKIRAKLKAI EQSFDQDESG NRTSVDLRIR RTQHSVLSRK FVEAMAEYNE AQTLFRERSK 240
  241 GRIQRQLEIT GRTTTDDELE EMLESGKPSI FISDIISDSQ ITRQALNEIE SRHKDIMKLE 300
  301 TSIRELHEMF MDMAMFVETQ GEMINNIERN IMNATDYVEH AKEETKKAIK YQSKARRKKW 360
  361 IIIAVSVVLV AIIALIIGLS VGK

Type	Start	End	Confidence
Cytoplasmic	1	359	0.88
Transmembrane Helix	360	381	0.94
Non-Cytoplasmic	382	383	0.76