YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109099172, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVAARSGP FAPVLSATSR GVAGALRPLV QATVPATPKP PVLDLKRPFL SRESLSGQAV  60
   61 RRPLVASVGL NVPASVCYSH TDVKVPDFYD YRRLEVLDST KSSRESSEAR KGFSYLVTAV 120
  121 TTVGVAYAAK NVVTQFISTM SASADVLAMA KIEIKLSDIP EGKNMTFKWR GKPLFVRHRT 180
  181 QKEIEQEAAV ELSQLRDPQH DLDRVKKPEW VILIGVCTHL GCVPIANAGD FGGFYCPCHG 240
  241 SHYDASGRIR LGPAPLNLEV PPYEFTSDDM VVVG

Type	Start	End	Confidence
Signal Peptide	1	24	0.90
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	274	0.97