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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109099160
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQKLAQPRA KKCGRLRGVY FCPQPKATEP SPALPPPHWA QAASGERTHI HRGRLLSGEA  60
   61 ITEALIIHQV GLTAAHGTEA VAHGRGSEPD DEVPTLTTRH YHSGSPARGP GPAWPRPVDD 120
  121 DGLAPVSYNL ALSTRPPSAS RMRLWKAVVV TLAFMSVDIC VTTAIYVFSH LDRSLLEDIR 180
  181 HFNIFDSVLD LWAACLYRSC LLLGATIGVA KNSALGPRRL RASWLVITLV CLFVGIYAMV 240
  241 KLLLFSEVRR PIRDPWFWAL FVWTYISLGA SFLLWWLLST VRPSTQALEP GAATEAEGFP 300
  301 GSGLPPPEQA SGATLQKLLS YTKPDVAFLV AASFFLIVAA LGETFLPYYT GRAIDGIVIQ 360
  361 KSMDQFSTAV TIVCLLAIGS SFAAGIRGGI FTLIFARLNI RLRNCLFRSL VSQETSFFDE 420
  421 NRTGDLISRL TSDTTMVSDL VSQNINVFLR NTVKVTGVVV FMFSLSWQLS LVTFMGFPII 480
  481 MMVSNIYGKY YKRLSKEVQN ALARASNTAE ETISAMKTVR SFANEEEEAE VYLRKLQQVY 540
  541 KLNRKEAAAY MYYVWGSGLT LLVVQVSILY YGGHLVISGQ MTSGNLIAFI IYEFVLGDCM 600
  601 ESVGSVYSGL MQGVGAAEKV FEFIDRQPTM VHDGSLAPDH LEGRVDFENV TFTYRTRPHT 660
  661 QVLQNVSFSL CPGKVTALVG PSGSGKSSCV NILENFYPLE GGRVLLDGKP ISAYDHKYLH 720
  721 RVISLVSQEP VLFARSITDN ISYGLPTVPF EMVVEAAQKA NAHGFIMELQ DGYSTETGEK 780
  781 GAQLSGGQKQ RVAMARALVR NPPVLILDEA TSALDAESEY LIQQAIHGNL QKHTVLIIAH 840
  841 RLSTVEHAHL IVVLDKGRVV QQGTHQQLLA QGGLYAKLVQ RQMLGLEPAV DFTAGHKEPA 900
  901 ANGSHKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle