YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109099088
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALKSWLSR SVTSLFRYRQ CLCVPVVANF KKRCFSELIR PWHKTVTVGF GVTLCAVPIA  60
   61 QAVYTLISLY RQYTSLLGKM NSQEEDEVWQ VIIGARAEMS SKHQEYLKLE TTWMTAVGLS 120
  121 EMAAEAAYQT GADQASITAR NHIQLVKLQV DEVHQLSRKA ETKLAEAQIE ELRQKTQEEG 180
  181 EDRAELEQEA YLRED

Type	Start	End	Confidence
Cytoplasmic	1	44	0.64
Transmembrane Helix	45	65	0.68
Non-Cytoplasmic	66	195	0.92