YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109098625
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVMAVTEP KWVSVWGRFL WVTLLSMVLG SLLALLLPLG AVEEQCLAVL KGFYLLRSKL  60
   61 DRAQHAAAKC SSPSTELSIT SRGVTLLVAK TKASPGKLEA RAALNQALEM KRQGKREKAQ 120
  121 KLFMHALKMD PDFVDALTEF GIFSEEDKDI IQADYLYTRA LTISPYHEKA LVSRDRTLPL 180
  181 VEEIDQRYFS IIDSKVKKIM SIPKGNSALR RVMEETYYHH IYHTVAIEGN TLTLSEIRHI 240
  241 LETRYAVPGK SLEEQNEVIG MHAAMKYINT TLVSRIGSVT ISDVLEIHRR VLGYVDPVEA 300
  301 GRFRTTQVLV GHHIPPHPQD VEKQMQEFVQ WLNSEDAMNL HPVEFAALAH YKLVYIHPFI 360
  361 DGNGRTSRLL MNLILMQAGY PPITIRKEQR SEYYHVLEAA NEGDVRPFIR FIAKCTETTL 420
  421 DTLLFATTEY SVALPEAQPN HSGFKETLPV KPSP

Type	Start	End	Confidence
Signal Peptide	1	41	0.59
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	454	0.98