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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109097247
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERSPGEGPS PSPMDQPSAP SDPTDQPPAA HAKLDPGSGG QPAGPGAAGE ALAVLTSFGR  60
   61 RLLVLIPVYL AGAVGLSVGF VLFGLALYLG WRRVRDEKER SLRAARQLLD DEEQLTAKTL 120
  121 YMSHRELPAW VSFPDVEKAE WLNKIVAQVW PFLGQYMEKL LAETVAPAVR GSNPHLQTFT 180
  181 FTRVELGEKP LRIIGVKVHP GQRKEQILLD LNISYVGDVQ IDVEVKKYFC KAGVKGMQLH 240
  241 GVLRVILEPL IGDLPIVGAV SMFFIRRPTL DINWTGMTNL LDIPGLSSLS DTMIMDSIAA 300
  301 FLVLPNRLLV PLVPDLQDVA QLRSPLPRGI IRIHLLAARG LSSKDKYVKG LIEGKSDPYA 360
  361 LVRLGTQTFC SRVIDEELNP QWGETYEVMV HEVPGQEIEV EVFDKDPDKD DFLGRMKLDV 420
  421 GKVLQAGVLD DWFPLQGGQG QVHLRLEWLS LLSDAEKLEQ VLQWNRGVSS RPEPPSAAIL 480
  481 VVYLDRAQDL PLKKGNKEPN PMVQLSIQDV TQESKAVYST NCPVWEEAFR FFLQDPQSQE 540
  541 LDVQVKDDSR ALTLGALTLP LARLLTAPEL TLDQWFQLSS SGPNSRLYIK LVMRILYLDS 600
  601 SEICFPTVPG SPGAWDVDSE SPQRGSSVDA PPRPCHTTPD SQFGTEHVLR IHVLEAQDLI 660
  661 AKDRFLGGLV KGKSDPYVKL KLAGRSFRSH VVREDLNPRW NEVFEVIVTS VPGQELEVEV 720
  721 FDKDLDKDDF LGRCKVSLTT VLNSGFLDEW LTLEDVPSGR LHLRLERLTP RPTAAELEEV 780
  781 LQVNSLIQTQ KSAELAAALL SVYMERAEDL PLRKGTKPPN PYATLTVGDT SHKTKTVSQT 840
  841 SAPVWDESAS FLIRKPHIES LELQVRGEGT GLLGSLSLPL SELLVADQLC LDRWFTLSSG 900
  901 QGQVLLRAQL GILVSQHSGV EAHSHSYSHS SSSLSEEPEL WGGPPHITSS APELRQRLTH 960
  961 VDSPLEAPAG PLGQVKLTVW YYSEERKLVS IVHGCRALRQ NGRDPPDPYV SLLLLPDKNR1020
 1021 GTKRKTSQKK RTLSPEFNER FEWELPLDEA LRRKLDVSVK SNSSFMSRER ELLGKVQLDL1080
 1081 AETDLSQGVA RWYDLMDDKD KGSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle