YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109098041
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTPALAAPE SFSSLFGARS GVGPATVAAM PMKGRFPIRR TLQYLSQGNV VFKESVKVMT  60
   61 VNYNTHGELG EGARKFVFFN IPQIQYKNPW VQIMMFKNMT PSPFLRFYLD SGEQVLVDVE 120
  121 TKSNKEIMEH IRKILGKNEE TLREEEEKKK ELSHPANFGP RKYCLRECIC EVEGQVPCPS 180
  181 VVPLPKEMRG KYKAILKASA QD

Type	Start	End	Confidence
Signal Peptide	1	20	0.51
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	202	0.89