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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109096705
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAAGSNEPD GVLSYQRPDE EAVVDQGGTS TILNIHYEKE ELEGHRTLYV GVRMPLGRQS  60
   61 HRHHRTHGQK HRRRGRGKGA SQGEEGLEAL AHDTPSQRVQ FILGTEEDEE HVPHELFTEL 120
  121 DEICMKEGED AEWKETARWL KFEEDVEDGG ERWSKPYVAT LSLHSLFELR SCLINGTVLL 180
  181 DMRANSIEEI SDLILDQQEL SSDLNDSMRV KVREALLKKH HHQNEKKRNN LIPIVRSFAE 240
  241 VGKKQSDPHS MDKHGQTVSP QSVPTTNLEV KNGVNCEHSP VDLSKVDLHF MKKIPTGAEA 300
  301 SNVLVGEVDI LDRPIVAFVR LSPAVLLSGL TEVPIPTRFL FILLGPVGKG QQYHEIGRSM 360
  361 ATIMTDEIFH DVAYKAKERD DLLAGIDEFL DQVTVLPPGE WDPSIRIEPP KNVPSQEKRK 420
  421 MPGVPNGNVC HIEQEPHGGH SGPELQRTGR LFGGLVLDIK RKAPWYWSDY RDALSLQCLA 480
  481 SFLFLYCACM SPVITFGGLL GEATEGRISA IESLFGASMT GIAYSLFAGQ ALTILGSTGP 540
  541 VLVFEKILFK FCKDYALSYL SLRACIGLWT AFLCIVLVAT DASSLVCYIT RFTEEAFASL 600
  601 ICIIFIYEAI EKLIHLAETY PIHMHSQLDH LSLYYCRCTL PENPNNHTLQ YWKDHNIVTA 660
  661 EVHWANLTVS ECQEMHGEFM GSACGHHGPY TPDVLFWSCI LFFTTFILSS TLKTFKTSRY 720
  721 FPTRPTRDDR GWIINPIGPN PWWTVIAAII PALLCTILIF MDQQITAVII NRKEHKLKKG 780
  781 CGYHLDLLMV AIMLGVCSIM GLPWFVAATV LSITHVNSLK LESECSAPGE QPKFLGIREQ 840
  841 RVTGLMIFVL MGCSVFMTAI LKFIPMPVLY GVFLYMGVSS LQGIQFFDRL KLFGMPAKHQ 900
  901 PDFIYLRHVP LRKVHLFTLI QLTCLVLLWV IKASPAAIVF PMMVLALVFV RKVMDLCFSK 960
  961 RELSWLDDLM PESKKKKLDD AKKKAKEEEV IVLAPTVYLR ASNYRT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle