YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109097525
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLRSLRVF LVARTGSHSA GSLLRQSPQP RHTLHAGPRL SASASSKELL MKLRRNTGYS  60
   61 FVNCKKALET CGGDLKQAEI WLHKQAQKEG WSKAAKLQGR KTKEGLIGLL QEGNTTVLVE 120
  121 VNCETDFVSR NLKFQQLVQQ VALGTMMYCQ SLKDQLSTYS KGFLNSSELS GLPAGPDRDG 180
  181 SLKDQLALAI GKLGENMTLK RAAWVKVPSG FYVGSYVHGA MQSPSLHNLV LGKYGALVIC 240
  241 ETSEQKTNLE DIGRRLGQHV VGMAPLSVGS LDDEPGGEAE TKMLSQPYLL DPSITLGQYV 300
  301 QPQGVSVVDF VRFECGEGEE AAETE

Type	Start	End	Confidence
Signal Peptide	1	19	0.90
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	325	0.99