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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109097438
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFVSEGAP GCLPVLAAAG RARGRAELLI STVGPEDCVV PFLTRPKVPV LQLDSGNYLF  60
   61 STSAICRYFF LLSGWEQDDL TNQWLEWEAT ELQPALSAAL YYLVVQGKKG EDVLGSVRRA 120
  121 LTHIDHSLSR QNCPFLAGET ESLADIVLWG ALYPLLQDPA YLPEELSALH SWFQTLSTQE 180
  181 PCQRAAETVL KQQGVLALRP YLQKQPQPSP AEGRAVTNEP EEEELATLSE EEIAMAVTAW 240
  241 EKGLESLPPL RPQQNPVLPV TGERNVLITS ALPYVNNVPH LGNIIGCVLS ADVFARYSRL 300
  301 RQWNTLYLCG TDEYGTATET KAMEEGLTPQ EICDKYHIIH ADIYRWFNIS FDTFGRTTTP 360
  361 QQTKITQDIF QRLLTRGFVL QDTVEQLRCE HCARFLADRF VEGVCPFCGY EEARGDQCDK 420
  421 CGKLINAVEL KKPQCKVCRS CPVVQSTHHL FLDLPKLEKR LEEWLGRTLP GSDWTPNARF 480
  481 ITRSWLRDGL KPRCITRDLK WGTPVPLEGF EDKVFYVWFD ATIGYLSITA NYTDQWERWW 540
  541 KNPEQVDLYQ FMAKDNVPFH GIVFPCSALG AEDNYTLVSH LIATEYLNYE DGKFSKSRGV 600
  601 GVFGDMAQDT GIPADIWRFY LLYIRPEGQD SAFSWTDLLL KNNSELLNNL GNFINRAGMF 660
  661 VSKFFGGYVP EMVLTPDDQR LLAHVTLELQ HYHQLLEKVR IRDALRSILT ISRHGNQYIQ 720
  721 VNEPWKRIKG SEADRQRAGT VTGLAVNIAA LLSVMLQPYM PTVSATIQAQ LQLPPPACSI 780
  781 LLTNFLCTLP AGHQIGTVSP LFQKLENDQI ESLRQRFGGG QAKTSPKPTV IETVTTAGPQ 840
  841 QIQALMDEVT KQGNIVRELK AQKADKNQVA AEVAKLLDLK KQLAVAEGKP PEAPKGKKKK 900
  901 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle