YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109095116
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALGQRLFIT MSRGAGRLRG TLWALVFLGI LVGMVVPSPA GTRANNTLLD SRGWGTLLSR  60
   61 SRAGLAGEIA GVNWESGYLV GIKRQRRLYC NVGIGFHLQV PPDGRISGTH EENPYSLLEI 120
  121 STVERGVVSL FGVRSALFVA MNSKGRLYAT PSFQEECKFR ETLLPNNYNA YESDLYRGTY 180
  181 IALSKYGRVK RGSKVSPTMT VTHFLPRI

Type	Start	End	Confidence
Cytoplasmic	1	20	0.66
Transmembrane Helix	21	41	0.67
Non-Cytoplasmic	42	208	0.85