YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109095031
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLSRQLCA LSYPKAAETQ TAEPGGAHAV CSRHPVRVKG LEDSEMESER EVINLQPGSS  60
   61 DPRRSQPINL NHYATKKSVA ESMLDVALFM SNAMRLKAVL EQGPSSHYYI TLVTLLSLSL 120
  121 LLQVAIGVLL VVIARLNLNE VEKQWRLNQL NNVATVLVFF TVVINVFITA FGAHKTGFLT 180
  181 ARASRNPLNT TRDPGTGPGT PTSFLRDLPG SWALSTAQES F

Type	Start	End	Confidence
Cytoplasmic	1	107	0.71
Transmembrane Helix	108	134	0.83
Non-Cytoplasmic	135	152	0.59
Transmembrane Helix	153	174	0.91
Cytoplasmic	175	221	0.62