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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109095021
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRASGTAS NGETKPVYPV MEKEEEEGTL ERGHWNNKME FVLSVAGEII GLGNVWRFPY  60
   61 LCYKNGGGAF FIPYLVFLFT CGVPVFLLET ALGQYTSQGG VTAWRKICPI FEGIGYASQM 120
  121 IVILLNVYYI IVLAWALFYL FSSFTIDLPW GGCHHEWNTE HCVEFQKTNG SLNGTSENAT 180
  181 SPVIEFWERR VLKISDGIQH LGALRWELAL CLLLAWVICY FCIWKGVKST GKVVYFTATF 240
  241 PYLMLVVLLI RGVTLPGAAQ GIQFYLYPNL TRLWDPQVWM DAGTQIFFSF AICLGCLTAL 300
  301 GSYNKYHNNC YRDCLALCFL NSGTSFVAGF AIFSILGFMS QEQGVPISEV AESGPGLAFI 360
  361 AYPRAVVMLP FSPLWACCFF FMVVLLGLDS QFVCVESLVT ALVDMYPRVF RKKNRREVLI 420
  421 LGVSVVSFLV GLVMLTEGGM YVFQLFDYYA ASGMCLLFVA IFESLCVAWV YGARRFYDNI 480
  481 EDMIGYRPWP LIKYCWLFLT PAVCTATFLF SLIKYTPLTY NKKYTYPWWG DALGWLLALS 540
  541 SMVCIPAWSL YRLGTLKGPF RERIRQLMCP AEDLPQRNPA GSSAPATPRT SLLRLTELES 600
  601 HC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle