YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109094458
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRGPRSLRG RDAPAPTPCV PAECFDLLVR HCVACGLLRT PRPKPAAPAS SPAPRTALQP  60
   61 QESVGAGAGE AALSLPGLLF GAPALLGLAL VLALVLVGLV SWRRRQRRLR GASSAEAPDG 120
  121 DKDKDEPLDK VIILSPGISD AAAPAWPPPG EDPGTTPPGH SVPVPATELG STELVTTKTA 180
  181 GPEQQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	78	0.86
Transmembrane Helix	79	102	0.90
Cytoplasmic	103	185	0.94