YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109093951
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVPLTQRTL LSLILALLFP SMASMAAMGS CSKEYRMLLG QLQKQTDLMQ DTSRLLDPYI  60
   61 RIQGLDIPKL REHCRESPGA FPSEETLRGL GRRGFLQTLN ATLGRVLHRL ADLEQHLPKA 120
  121 QDLERSGLNI EDLEKLQMAR PNVLGLRNNV YCMAQLLDNS DMTEPTKAGR GTPQPPTPTP 180
  181 TSDVFQRKLE GCSFLRGYHR FMHSVGRVFS KWGESPNRSR RHSPHQALRK GVRRTRPSRK 240
  241 GNRLMPRGQL PR

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	252	0.99