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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109093538, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRLVVLGL LAVVLVLVIV GLCLWLPSAS KEPDNHVYTR AAVAADAKQC SEIGRDALQD  60
   61 GGSAVDAAIA ALLCMGLMNA HSMGIGGGLF LTIYNSTTRK AEVINAREVA PRLAFASMFN 120
  121 SSQQSQNGGL SVAVPGEIRG YELAHQRHGR LPWARLFRPS IQLARQGFPV GKGLAAALEN 180
  181 KRTVIEQQPV LCEVFCRDGK VLREGERLTL PRLADTYETL AIEGAQAFYN GSLTAQIVKD 240
  241 IQAAGGIVTA EDLNNYRAEL IEHPLNISLG DAVLYMPSAP LSGPVLALIL NILKGYNFSR 300
  301 ASVETPEQKG LLYHRIVEAF RFAYAKRTLL GDPKFVDVTE VVRNMTSEFF AAQLRAQISD 360
  361 DTTHPISYYK PEFYTPDDGG TAHLSVVAED GSAVSATSTI NLYFGSKVRS PVSGILFNDE 420
  421 MDDFSSPSIT NQFGVPPSPA NFIQPGKQPL SSMCPTIMVG QDGQVRMVVG ASGGTQITTA 480
  481 TALAIIYNLW FGYDVKRAVE EPRLHNQLLP NVTTVERNID QAVTAALETR HHDTEIASTF 540
  541 IAVVQAVVHT PGGWAAASDS RKGGEPAGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle