YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109091971
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHLERCEWL LRGTLVRAAV RRYLPWALVA SMLAGSLLKE LSPLPESYLS NKRNVLNVYF  60
   61 VKMAWAWTFC LLLPFIALTN YHLTGKAGLV LRRLSTLLVG TAIWYICTSI FSNIEHYTGS 120
  121 CYQSPALEGV RKEHQSKQQC HQEGGFWHGF DISGHSFLLT FCALMIVEEM SVLHEVKTDR 180
  181 SHCLHTAITT LVVALGILTF IWVLMFLCTA VYFHNLSQKV FGTLFGLLGW YGTYGFWYPK 240
  241 AFSPGLPPQS CSLNLKQDSY KK

Type	Start	End	Confidence
Cytoplasmic	1	19	0.96
Transmembrane Helix	20	38	0.93
Non-Cytoplasmic	39	62	0.89
Transmembrane Helix	63	83	0.92
Cytoplasmic	84	93	0.77
Transmembrane Helix	94	114	0.87
Non-Cytoplasmic	115	151	0.93
Transmembrane Helix	152	173	0.84
Cytoplasmic	174	186	0.78
Transmembrane Helix	187	208	0.90
Non-Cytoplasmic	209	219	0.66
Transmembrane Helix	220	238	0.89
Cytoplasmic	239	262	0.90