YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109091545
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLLALLGP AGRVGARVRP RATWLLGSTA PCAPPPLALA LLPPRPDARL LRTARGDCRG  60
   61 RQDPSQATET TGSSVSCTEE KKQSKSQQLK KIFQEYGTVG VSLHIGISLI SLGIFYMVVS 120
  121 SGVDMSAVLL KLGFEESLVQ SKMAAGTSTF VVAYAIHKLF APVRISMTLV SVPLIVRYFR 180
  181 KVGFFKPPAA KP

Type	Start	End	Confidence
Cytoplasmic	1	95	0.55
Transmembrane Helix	96	119	0.74
Non-Cytoplasmic	120	153	0.57
Transmembrane Helix	154	179	0.53
Cytoplasmic	180	192	0.74