YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109091410
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRGPSSAVL PSALGSRKLT PRSLSCLSDL DGGVALEPRP CRPPGSPGRA PPPAPAPSGC  60
   61 DPRLRPIILR RARSLPSSPE RRQKAAGAPG AACRPGCSRQ LRVRFADALG LELAQVKVFN 120
  121 AGDDPSVPLH VLSRLAINSD LCCSSQDLEF TLQYLVPDFP PPVEAADFGE RLQRQLVCLE 180
  181 RVTCSDLGIS GTVRVCNVAF EKQVAVRYTF SGWRSTHEAV ARWRGPEGPE GKEDVFTFGF 240
  241 PVPPFLLELG SRVHFAVRYR VAGAEYWDNN DCRDYSLTCR NHALHMPRGE CEESWIHFI

Type	Start	End	Confidence
Signal Peptide	1	15	0.77
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	299	0.99