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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109091349
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSDVSAEP VPSPPAREVQ PHKAPLLQRT CYSVGGHLAT HLRAGPFPGD RAPPPGATPS  60
   61 SHVETRAHAE ERLLKKLFSG YNKWSRPVAN ISDVVLVRFG LSIAQLIDVD EKNQMMTTNV 120
  121 WVKQEWHDYK LRWDPADYEN VTSIRIPSEL IWRPDIVLYN NADGDFAVTH LTKAHLFHDG 180
  181 RVQWTPPAIY KSSCSIDVTF FPFDQQNCTM KFGSWTYDKA KIDLVNMHSR VDQLDFWESG 240
  241 EWVIVDAVGT YNTRKYECCA EIYPDITYAF VIRRLPLFYT INLIIPCLLI SCLTVLVFYL 300
  301 PSECGEKITL CISVLLSLTV FLLLITEIIP STSLVIPLIG EYLLFTMIFV TLSIVITVFV 360
  361 LNVHHRSPRT HTMPAWVRRV FLDIVPRLLL MKRPSVVKDN CRRLIESMHK MASAPRFWPE 420
  421 PEGEPAATSG TQSRHPPSPS CVPLDVPAES GPACKSPSDQ LPALQPPEAE KASPHPSPGP 480
  481 YRPPHSTQAP GLAKARSLSV QHMSSPGEAV EGGVRCRSRS IQYCVPRDNA APEADVQAAG 540
  541 ALASRKTHSA ELPPPDQPSP RKCTCGKEPP SVSPSATLKA RSTKAPPRHL PLSPALTRAV 600
  601 EGVQYIADHL KAEDADFSVK EDWKYVAMVI DRIFLWMFII VCLLGTVGLF LPPWLAGMI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle