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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109089628
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEAALALQ PGGSPSAAGA EREAGSPPAG EPLRKRPRRD GPGLERSPGE PGGAAPEREV  60
   61 PAAGGCPVAA AALWREAEAA AAGGEQEAQA TAAAGEGDNG PGLQGPSREP PLADSFYDED 120
  121 DDDEGEEEEE AAAAAIGYRD NLLFGDEIIT NGFHSCESDE EDRASHASSS DWTPRPRIGP 180
  181 YTFVQQHLMI GTDPRTILKD LLPETIPPPE LDDMTLWQIV INILSEPPKR KKRKDINTIE 240
  241 DAVKLLQECK KIIVLTGAGV SVSCGIPDFR SRDGIYARLA VDFPDLPDPQ AMFDIEYFRK 300
  301 DPRPFFKFAK EIYPGQFQPS LCHKFIALSD KEGKLLRNYT QNIDTLEQVA GIQRIIQCHG 360
  361 SFATASCLIC KYKVDCEAVX GKIYKNLSIP YIENSPIKSV KIMKLASYCG NLLKLFHTSM 420
  421 KYDKDEVDLL IVIGSSLKVR PVALIPSSIP HEVPQILINR EPLPHLHFDV ELLGDCDVII 480
  481 NELCHRLGGE YAKLCCNPVK LSEITEKPPR TQKELAYLSD LPPTPLHISE DSSSPERTSP 540
  541 PDSSVIVTLL DQAAKSNDDL DVSESKGRME EKPQEVQTSR NVESIAEHMG NPDLKNVGSS 600
  601 TGEKNERTSV AGTVRKCWPS RVAKEQISKR LDGNQYLFLP PNRYIFHGAE VYSDSEDDVL 660
  661 SSSSCGSNSD SGTCQSPSLE EPMEDESEIE EFYNGLEDEP DIPERAGGAG FGTDGDDQEA 720
  721 INEAISMKQE VTDMNYPSNK S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle