YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109088560
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRHSSYIFI WLQLELCAMA VLLTKGEIRC YCDAAHCVAT GYMCKSELSA CFSRLLDPQN  60
   61 SNSPLTHGCL DSLASTADIC QAKQARNHSG TTMPTLECCH EDMCNYRGLH DVLSPPKGEA 120
  121 SGQGNRYQHD GSRNLITKVQ ELTSSKELWF RATVIAVPIA GGLILVLLIM LALRMLRSEN 180
  181 KRLQDQRQQM LSRLHYSFHG HHSKKGQVAK LDLECMVPVS GHENCCLTCD KMRQADLSND 240
  241 KILSLVHWGM YSGHGKLEFV

Type	Start	End	Confidence
Non-Cytoplasmic	1	148	0.68
Transmembrane Helix	149	173	0.88
Cytoplasmic	174	260	0.70