YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109087265
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISQFRLFK FCTCLATVFS FLKRLICRSG RGRKLSGDQI TLPTTVDYSS VPKQTDVEEW  60
   61 TSWDEDAPTS VKIEGGNGSV ATQQNSLEQL EPDYFKDMTP TIRKTQKIVI KKREPLNFGI 120
  121 PDGSTGFSSR LAATQDLPFI HQSSELGDLD TWQENTNAWE EEEDAAWQAE EVLRSRTNVC 180
  181 SLCSVLFHHP TPTSTPYINQ SVKIERVSLG QWSYGKSKEG QKLADREKRA AEQQRKKMEK 240
  241 EAQRLMKKEQ NKIGVKLS

Type	Start	End	Confidence
Signal Peptide	1	29	0.77
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	258	0.94