YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109086473
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSALAAAAA AVTIFTAPER RRRRRRKTFQ TFQTLNKGFF FFPTDLTFGS PAASPPALSE  60
   61 ATSGVLAAPP GDGLGAGEAE ARVNTRGTHA KEGTFGNPNL ECLVFRIRKE KEIKCEETHA 120
  121 PNSNCKKTVR MPVVTGRLRD PDINPCLSES DASTRCLDEN NYDKERCSTY FLKYKNCRKF 180
  181 WHSIMIQRRR NGVKPCMPTA AERDEILRAM GKMPY

Type	Start	End	Confidence
Signal Peptide	1	16	0.98
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	215	0.99