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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109086388
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPRLFCWTT LFLLAGWCLP GLPCPSRCLC FKSTVRCMHL MLDHIPQIPQ QTTVLDLRFN  60
   61 RIREIPGSAF KKLKNLNTLL LNNNHIRKIS RSAFEGLENL QYLYLYKNEI HALDKQTFKG 120
  121 LISLEHLYIH FNQLETLQPE TFGDLPKLER LFLHNNKLSK IPAGSFSNLD SLKRLRLDSN 180
  181 VLVCDCDLMW LGELLQGFAQ HGHTQAAATC EYPRRLQGRA VASVTVEEFN CQSPRITFEP 240
  241 QDVEVPSGNT VYFTCRAEGN PKPEIIWIHN NHSLDLEDDT RLNMFDDGTL MIQNTRESDQ 300
  301 GVYQCMARNS AGEAKTQSAM LRYSGRPVKP AFVIQPQDTE VLIGTSTTLE CMATGHPHPH 360
  361 ITWTRDNGLE LDGSRHVATS SGLYLQNITQ RDHGRFTCHA NNSYGSVQAT ANIIVQAPPQ 420
  421 FTVAPKDQVV LEEHAIEWLC EADGNPPPVI VWTKTGGQLP VEGRHTVLSS GTLRIDHAAQ 480
  481 HDQGQYECQA VSSLGLKKVS VQLTVKPKAL AVFTQRPQDT SVQVGKNINI SCHAQGEPQP 540
  541 IITWNKEGVQ ITESGKFHVD GEGTLTIYDA GFPDQGRYEC VARNSFGLVV TNMFLTVTAI 600
  601 QGRQAGDDFV ESSILDAVQR VDSAINSTRR HLFSQKPHTS SDLLAQFHYP RDPLIVETAR 660
  661 AGEIFEHTLQ LIRERAKQGL TVDLEGKEFR YNDLVSPRSL GLIASLSGCT ARRPLPNCSH 720
  721 PCFHRKYRAH DGTCNNLQQP TWGAALTAFA RLLQPAYQDG IRSPRGLGLP VGSRQPLPPP 780
  781 RLVATVWARA AAVTPDHSYT RMLMHWGWFL EHDLGHTVPA LSTARFLDGR PCSSVCTNDP 840
  841 PCFPMNTRHA NPRGTHATCM LFARSSPACA SGRPSAKVGS VYAREQINQQ TAYIDGSNVY 900
  901 GSSERESQAL RDPSVLRGLL RTGLPWPPSG KHLLPYSTDP PTGCERQEQD SPCFLAGDHR 960
  961 ANEHLALTAM HTLWFREHNR LARELSALNP HWDGDTVYQE ARKIVGAELQ HITYSHWLPK1020
 1021 VLGDPGTRML RGYRGYNPNV NAGIINSFAT AAFRFGHILI NPILYRLNDT LGEISEGHLP1080
 1081 FNKALFSPSR IIKEGGIDPV LRGLFGVAAK WRATSYLLSL ELTQRLFSAA YSAAVDSAAT1140
 1141 IIQRGRDHGI PPYVDFRVFC NLTSVKNFED LQNEIKDSEI RQKLRKLYGS PGDIDLWPAL1200
 1201 MVEDLIPGTR VGPTLMCLFV TQFQRLRDGD RFWYENPGVF TPAQLTQLKQ ASLGRVLCDN1260
 1261 GDSIQQVQAD VFVKAEYPQD YLSCSEIPKV DLRVWQDCCA DKQAGGTPEA GRVYRC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle