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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109085864
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVERVVYFL KKSAFLRPDI HLNEMSHNGR VSLDILHPIN ISPNFGLVGF FRRLIIVGSG  60
   61 AASSLKSECN MVYLEFDQEI LVPLAGGNMQ KNHRLRARPL LEYLSELGRE EKSFWDEPKV 120
  121 VKCTFKSSGR SQRSSRVTAG WRVGAGAYHS QGREAQEGAG WPGPGSAGPT WQPRGERGGS 180
  181 GAGRGRVRSL TRRVYSRACA RCCGPDARRG VGARVYADAR AELLLQPPPA ARDLAVRLRG 240
  241 AGAASERQAY LVTMKLLHPA FQSCLLLTLL GLWRTTPEAH ASSPGAPAIS AASFLQDLMH 300
  301 RYGEGDSLTL QQLKALLNHL DVGVGRGNVT QHVQGHRNLS TCFSSGDLFA AHNFSEQSRI 360
  361 GSSELQEFCP TILQQLDSRA CTSENQENEE NEQTEEGRPS AVEVWGFGFL SVSLINLASL 420
  421 LGVLVLPCTE KAFFSRVLTY FIALSIGTLL SNALFQLIPE AFGFNPLEDY YVSKSAVVFG 480
  481 GFYLFFFTEK ILKILLKQKN EHHHGHSHYA SETLPSKKDQ EEGVMEKLQN GDLDHMIPQH 540
  541 CNSELDGKAP VVDEKVIVGS LSVQDLQASQ SACYWLKGVR YSDIGTLAWM ITLSDGLHNF 600
  601 IDGLAIGASF TVSVFQGIST SVAILCEEFP HELGDFVILL NAGMSIQQAL FFNFLSACCC 660
  661 YLGLAFGILA GSHFSANWIF ALAGGMFLYI SLADMFPEMN EVCQEDERKG SILIPFVIQN 720
  721 LGLLTGFTIM VVLTMYSGQI QIG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle