YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109085733
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGRSRLSLV LLAAAVSCAV AQHAPPWTED CRKSTYPPSG PTYRGPAPWY TINLDLPPYK  60
   61 RWHELMADKA PMLKVIVNSL KNMVNTFVPS GKVMQIVDEK LPGLLGNFPG PFEEEMKGIA 120
  121 AVTDIPLGEI ISYNIFYEFF TLCTSIVAED KKGHLIHGRN MDFGVFLGWN INNDTWVITE 180
  181 ELKPLTVNLD FQRNNKTVFK ASSFAGYVGM LTGFKPGLFS LTLNERFSVN GGYLGILEWI 240
  241 LGKKDAMWIG FLTRTVLENS TSYEEAKNIL TKTKILAPAY FILGGNQSGE GCVITRDRKE 300
  301 SLDVYELDAK QGRWYVVQTN YDRWKNPFFL DDRRTPAKMC LNRTTQENIS FENMYDVLST 360
  361 KPVLNKLTVF TTLIDVTKDQ FETYMRDCPD PCIGW

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	395	0.99