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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109085649
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKSDGGGV GVGFAQLHNL DEAVGSGGEE DGEPGGGGCG GGGDGSEPGE SSSLHICHCC  60
   61 NTSSCYWGCR SACLRSLLGK KPRRSAAADG GDQPLQPPAA PGADRQPPTP SAARPEPPPP 120
  121 QVERPWLDCL WIVLALLVFF GDVGTDLWLA LDYYRKGDYG YFGLTLFFVL VPSLPVQSLS 180
  181 FRWFVQDYTG GGLGAVEGLS SRGPPMMGAV YGAARGVPGA GVSATPGAQR LCRLSVWIWQ 240
  241 SVIHLLQMGQ VWRYIRTMYL GIQSQRRKEH QRRFYWAMMY EYADVNMLRL LETFLESAPQ 300
  301 LVLQLCIMIQ KNSAETLPCV SSVTSLMSLA WVLASYHKLL RDSRDDKKSM SYRGAVIQLF 360
  361 WRLFTISSRV ISFALFASIF QLYFGIFVVV HWCAMAFWII HGGTDFCMSK WEEILFNMVV 420
  421 GIVYIFCWFN VKEGRTRYRM FAYYTIVLTE NAALTFLWYF YRDPETTDSY AVPALCCVFI 480
  481 SFVAGIALML LYYGVLHPMG PRAKILASSC CAELLWGIPL PPDVEPMEPQ IPGYRGTQVT 540
  541 PTRAVTEQQE DLTADTCLPV FQVRPMGPPT PLGRPYLPEG PLIKIDMPRK RYPAWDAHFV 600
  601 DRRLRRTINI LQYITPTRRE TQRSMVSCTV DTGLRRPVII LSVSATSLPL SSLCLPVGPS 660
  661 VDSKRPAFFE AHASTHIASG VALGPRGAFK EVEGWREEQV MLLRQLGHSL ITCEANVDHS 720
  721 GSIDKSGVLQ IDFSRNPSAH SMKSHLEPLL PSDRIGMTWS DTILGCVGEE RFSSSECTLP 780
  781 FRLRVVQLLD WFLEYQEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle