YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109085461
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGRNSAIAA GVCGALFIGY CIYFDRKRRS DPNFKNRLRE RRKKQKLTKE RAGLSKLPDF  60
   61 KDAEAVQKFF LEEIQLGEEL LAQGEHEKGI DHLTNAIVVC GQPQQLLQVL QQTLPPPVFQ 120
  121 MLLTKLPTIS QRIVSAQSLA EDDVE

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.68
Transmembrane Helix	7	24	0.85
Cytoplasmic	25	145	0.72