YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109085043
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLLPLPAP GLLLLEAETH PHFPHNHRQE GDCMGHAKMR TYPGPLVHQR KRPAWLWALL  60
   61 APSLREALCP SLSLQQVQGS PGRCPLWPWW QHSLPHFQQN GAQKSWDFMK THDSVTVLLF 120
  121 NSSRRSLVLV KQFRPAVYAG EVERHFPGSL AAVDQDRPRE LQPALPGSAG VTVELCAGLV 180
  181 DQPGLSLEEV ACKEAWEECG YHLAPSDLRR VATYWSGVGL TGSRQTMFYT EVTDAQRSGP 240
  241 GGGLAEEGEL IEVVHLPLEG AQAFADDPDI PKTLGVIFGV SWFLSQVAPN LDLQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.85
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	294	0.99