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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109084784
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSPALQPLS MAGLQLMTPA SSPMGPFFGL PWQQEAIHDN IYTPRKYQVE LLEAALDHNT  60
   61 IVCLNTGSGK TFIAVLLTKE LSYQIRGDFN RNGKRTVFLV NSANQVAQQV SAVRTHSDLK 120
  121 VGEYSNLEVN ASWTKERWNQ EFTKHQVLIM TCYVALNVLK NGYLSLSDIN LLVFDECHLA 180
  181 ILDHPYREIM KLCENCPACP RILGLTASIL NGKCDPEELE EKIQKLEKIL KSNAETATDL 240
  241 VVLDRYTSQP CEIVVDCGPF TDRSGLYERL LMELEEALNF INDCNISVHS KERDSTLISK 300
  301 QILSDCRAVL VVLGPWCADK VAGMMVRELQ KYIKHEQEEL HRKFLLFTDT FLRKIHALCE 360
  361 EHFSPASLDL KFVTPKVIKL LEILRKYKPY ERQQFESVEW YNNRNQDNYV SWSDSEDDDE 420
  421 DEEIEEKEKP ETNFPSPFTN ILCGIIFVER RYTAVVLNRL IKEAGKQDPE LAYISSNFIT 480
  481 GHGIGKNQPR NKQMEAEFRK QEEVLRKFRA HETNLLIATS IVEEGVDIPK CNLVVRFDLP 540
  541 TEYRSYVQSK GRARAPISNY IMLADTDKMK SFEEDLKTYK AIEKILRNKC SKSVDTGETD 600
  601 IDPVVDDDDV FPPYVLRPDD GGPRVTINTA IGHINRYCAR LPSDPFTHLA PKCRTRELPD 660
  661 GTFYSTLYLP INSPLRASIV GPPMSCVRLA ERVVALICCE KLHKIGELDD HLMPVGKETV 720
  721 KYEEELDLHD EEETSVPGRP GSTKRRQCYP KAIPECLRDS YPKPDQPCYL YVIGMVLTTP 780
  781 LPDELNFRRR KLYPPEDTTR CFGILTAKPI PQIPHFPVYT RSGEVTISIE LKKSGFMLSL 840
  841 QMLELITRLH QYIFSHILRL EKPALEFKPT DADSAYCVLP LNVVNDSSTL DIDFKFMEDI 900
  901 EKSEARIGIP STKYTKETPF VFKLEDYQDA VIIPRYRNFD QPHRFYVADV YTDLTPLSKF 960
  961 PSPEYETFAE YYKTKYNLDL TNLNQPLLDV DHTSSRLNLL TPRHLNQKGK ALPLSSAEKR1020
 1021 KAKWESLQNK QILVPELCAI HPIPASLWRK AVCLPSILYR LHCLLTAEEL RAQTASDAGV1080
 1081 GVRSLPADFR YPNLDFGWKK SIDSKSFISI SNSSSAENDN YCKHSTIVPE NAAHQGANRT1140
 1141 SSLENHDQMS VNCRTLLSES PGKLHVEVSA DLTAINGLSY NQNLANGSYD LANRDFCQGN1200
 1201 QLNYYKQEIP VQPTTSYSIQ NLYNYENQPS DECTLLSNKY LDGNANKSTS DGSPMMAVMP1260
 1261 GTTDAIQVLK GRMDSEQSPS IGYSSRTLGP NPGLILQALT LSNASDGFNL ERLEMLGDSF1320
 1321 LKHAITTYLF CTYPDAHEGR LSYMRSKKVS NCNLYRLGKK KGLPSRMVVS IFDPPVNWLP1380
 1381 PGYVVNQDKS NTDKWEKDEM TKDCMLANGK LDEDYEEEDE EEESLMWRAP KEEADYEDDF1440
 1441 LEYDQEHIRF IDNMLMGSGA FVKKISLSPF STTDSAYEWK MPKKSSLGSM PFSSDFEDFD1500
 1501 YSSWDAMCYL DPSKAVEEDD FVVGFWNPSE ENCGVDTGKQ SISYDLHTEQ CIADKSIADC1560
 1561 VEALLGCYLT SCGERAAQLF LCSLGLKVLP VIKRTDREKA LCPTRENFNS QQKNLSVSCA1620
 1621 AASMASSRSS VLKDLEYGCL KIPPRCMFDH PDADKTLNHL ISGFENFEKK INYRFKNKAY1680
 1681 LLQAFTHASY HYNTITDCYQ RLEFLGDAIL DYLITKHLYE DPRQHSPGVL TDLRSALVNN1740
 1741 TIFASLAVKY DYHKYFKAVS PELFHVIDDF VQFQLEKNEM QGMDSELRRS EEDEEKEEDI1800
 1801 EVPKAMGDIF ESLAGAIYMD SGMSLETVWQ VYYPMMRPLI EKFSANVPRS PVRELLEMEP1860
 1861 ETAKFSPAER TYDGKVRVTV EVVGKGKFKG VGRSYRIAKS AAARRALRSL KANQPQVPNS1920
 1921 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle