YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109084589
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQEGDYGRW TISSSDESEE EKPKPDKPST SSLQGAANEP RYTCSEARKA AHKRKMSPVK  60
   61 FSDTDSVLPP KRQKSGSQED LGWCLSSSDD ELQPEMLQKQ AEKVVIKEEK DISAPSDGTA 120
  121 QRTENHGPPT CHRLKEEEEY ETSGEGQDIW DMLDKGNPFQ FYLTRVSGVK PKYNSGALHI 180
  181 KDILSPLFGT LVSSAQFNYC FDVDWLVKQY PPEFRKKPIL LVHGDKREAK AHLHAQAKPY 240
  241 ENISLCQAKL DIAFGTHHTK MMLLLYEEGL RVVIHTSNLI HADWHQKTQG IWLSPLYPRI 300
  301 VDGTHKSGES TTHFKADLIS YLMAYNAPSL KEWIDTIHEH DLSETNVYLI GSTPGRFQGS 360
  361 QKDNWGHFRL RKLLKDHASS IPNAESWPVV GQFSSIGSLG ADESKWLCSE FKESMLTLGK 420
  421 ESKTPGKSSV PLYLIYPSVE NVRTSLEGYP AGGSLPYSIQ TAEKQNWLHS YFHKWSAETS 480
  481 GRSNAMPHIK TYMRPSPDFS KIAWFLVTSA NLSKAAWGAL EKNGTQLMIR SYELGVLFLP 540
  541 SAFIGHGYGT FLMSKHRIRM GTCGCPPENL EAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle