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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109084458
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTEACKASP TQDLEAASNQ VPGPGIPLEK PPLRRGALLS SVIGQAAAWG PPPSLPDRPA  60
   61 RELAAALQPF PVSGRWVGCG AGLGAAAAAA AAAAHRACLA PGAARKMRPG PGGCCCRRTV 120
  121 RANGCVANGE VRNGYVRTSA AAAAAASQIH HVTQNGGLYK RPFNEAFEET PMLVAVLTYV 180
  181 GYGVLTLFGY LRDFLRHWRI EKCHHATERE EQKDFVSLYQ DFENFYTRNL YMRIRDNWNR 240
  241 PICSVPGARV DIMERQSHDY NWSFKYTGNI IKGVINMGSY NYLGFARNTG SCQEAAAKIL 300
  301 EEYGVGVCST RQEIGNLDKH EELEELVARF LGVEAAMAYG MGFATNSMNI PALVGKGCLI 360
  361 LSDELNHASL VLGARLSGAT IRIFKHNNMQ SLEKLLKDAI VYGQPRTRRP WKKILILVEG 420
  421 IYSMEGSIVR LPEVIALKKK YKAYLYLDEA HSIGALGPTG RGVVDYFGLD PEDVDVMMGT 480
  481 FTKSFGASGG YIGGKKELID YLRTHSHSAV YATSLSPPVV EQIITSMKCI MGQDGTSLGK 540
  541 ECVQQLAENT RYFRRRLKEM GFIIYGNEDS PVVPLMLYMP AKIGAFGREM LKRNIGVVVV 600
  601 GFPATPIIES RARFCLSAAH TKEILDTRQA ILVTLLPYVR IPAPRVPLEE TGKSPGFPPA 660
  661 ILPRGATKHL PGIRRRAPLS RPAAPPSPAR HRRSRSQSER GRGGQRWRRT LRAPQVAARG 720
  721 RSAPGRSFSP TGIRWGLRPR QQRGLRAGRR PDQRQPPAGP RWVGERRGSP PRTAGDVQVG 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle